BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A09LP1|AL429671
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1525 1623 0.0
>3x_Contig1525
Length = 8924
Score = 1623 bits (818), Expect = 0.0
Identities = 826/828 (99%), Gaps = 1/828 (0%)
Strand = Plus / Minus
Query: 1 gatcactttgttcaggtttggcccaaacgaataactcaactttagtgaattcatgaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 gatcactttgttcaggtttggcccaaacgaataactcaactttagtgaattcatgaaccc 1327
Query: 61 gatataaacctttagtatctttaccacttgcgcctgcctccgctctatatgctctgttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gatataaacctttagtatctttaccacttgcgcctgcctccgctctatatgctctgttca 1267
Query: 121 caccacaaatcttcttaggtcctgaacttagatccaatatagaatctaagcccatccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 caccacaaatcttcttaggtcctgaacttagatccaatatagaatctaagcccatccctg 1207
Query: 181 ccaaggcgatttccgcagtagcg-ttaatcctaaatcggtatctgataaccgataaattt 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1206 ccaaggcgatttccgcagtagcggttaatcctaaatcggtatctgataaccgataaattt 1147
Query: 240 gttgttcattattagtgtctcgtggtctaaacccgcacgcatctataacctcattacgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 gttgttcattattagtgtctcgtggtctaaacccgcacgcatctataacctcattacgca 1087
Query: 300 caacactgggaggaatcactaaattgaagttagccttgcgtgctttcgttgtagcatatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 caacactgggaggaatcactaaattgaagttagccttgcgtgctttcgttgtagcatatt 1027
Query: 360 gcaccaatgcatgttctagacgcgcaccatcattgcataaataataccatgaagtacctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gcaccaatgcatgttctagacgcgcaccatcattgcataaataataccatgaagtacctg 967
Query: 420 ttacattagaagcagtctcaaaatcaaccattcctttatttaccattattttaagatgtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ttacattagaagcagtctcaaaatcaaccattcctttatttaccattattttaagatgtt 907
Query: 480 caaacctttcatctggtttgtattgtgcttgtttattaatccattgatcaatgatcgggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 caaacctttcatctggtttgtattgtgcttgtttattaatccattgatcaatgatcgggc 847
Query: 540 ttgatgtctttggaacagaaggatgaatgagattgggtaaggatccacatacctcagtta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ttgatgtctttggaacagaaggatgaatgagattgggtaaggatccacatacctcagtta 787
Query: 600 tctgatccttcacttctctttgagttttcaatagatcttggtattgtttctttagtgatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tctgatccttcacttctctttgagttttcaatagatcttggtattgtttctttagtgatt 727
Query: 660 tgagttcagacccgagctctcttgcccttgttttatcttgttttacttgggcttcgatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tgagttcagacccgagctctcttgcccttgttttatcttgttttacttgggcttcgatgg 667
Query: 720 tctttcttgaatgttgaagattggcgattgtatgatcagcaaccctcgatttctggtaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tctttcttgaatgttgaagattggcgattgtatgatcagcaaccctcgatttctggtaca 607
Query: 780 actccggtaacatttttaaaratatttgaagttcctcgccgtccacaa 827
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 606 actccggtaacatttttaaagatatttgaagttcctcgccgtccacaa 559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5855
Number of Sequences: 1807
Number of extensions: 5855
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)